Dca61282.1
Annotation
- 3-exons
- f-238
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold950)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61282.1 |
1 |
164 |
164 |
70.73 |
164 |
56 |
8e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R2I1_ORYSJ |
856 |
1064 |
1064 |
19.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61282.1 |
53 |
129 |
164 |
23.78 |
77 |
51 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
478 |
554 |
1262 |
6.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold950 |
Augustus |
mRNA |
55591 |
56965 |
. |
+ |
. |
ID=Dca61282.1;Parent=Dca61282 |
| scaffold950 |
Augustus |
exon |
55591 |
55688 |
. |
+ |
. |
ID=Dca61282.1.exon1;Parent=Dca61282.1 |
| scaffold950 |
Augustus |
exon |
55859 |
56159 |
. |
+ |
. |
ID=Dca61282.1.exon2;Parent=Dca61282.1 |
| scaffold950 |
Augustus |
exon |
56633 |
56965 |
. |
+ |
. |
ID=Dca61282.1.exon3;Parent=Dca61282.1 |
