Carnation DB

Dca61345.1

Annotation

19-exons
f-1
sp|D7LLR4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_322489#GO:0005524;GO:0016301;GO:0017111;GO:0016773#4F0P0C
AT2G01460.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:206136-211765 FORWARD LENGTH=955
Repeat List (scaffold9511)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61345.1	21	242	647	14.83	222	41	4e-40
Target_name	Start	End	Length	Cov(%)
sp\|D7LLR4_ARALL	459	695	945	25.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61345.1	274	558	647	14.68	285	30	2e-26
Target_name	Start	End	Length	Cov(%)
AT2G01460.1	78	392	955	32.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9511	Augustus	mRNA	3140	16939	.	-	.	ID=Dca61345.1;Parent=Dca61345
scaffold9511	Augustus	exon	3140	3205	.	-	.	ID=Dca61345.1.exon1;Parent=Dca61345.1
scaffold9511	Augustus	exon	3294	3410	.	-	.	ID=Dca61345.1.exon2;Parent=Dca61345.1
scaffold9511	Augustus	exon	4220	4333	.	-	.	ID=Dca61345.1.exon3;Parent=Dca61345.1
scaffold9511	Augustus	exon	4429	4554	.	-	.	ID=Dca61345.1.exon4;Parent=Dca61345.1
scaffold9511	Augustus	exon	5188	5242	.	-	.	ID=Dca61345.1.exon5;Parent=Dca61345.1
scaffold9511	Augustus	exon	5896	5981	.	-	.	ID=Dca61345.1.exon6;Parent=Dca61345.1
scaffold9511	Augustus	exon	6087	6263	.	-	.	ID=Dca61345.1.exon7;Parent=Dca61345.1
scaffold9511	Augustus	exon	6344	6418	.	-	.	ID=Dca61345.1.exon8;Parent=Dca61345.1
scaffold9511	Augustus	exon	7016	7084	.	-	.	ID=Dca61345.1.exon9;Parent=Dca61345.1
scaffold9511	Augustus	exon	7899	8009	.	-	.	ID=Dca61345.1.exon10;Parent=Dca61345.1
scaffold9511	Augustus	exon	8883	9040	.	-	.	ID=Dca61345.1.exon11;Parent=Dca61345.1
scaffold9511	Augustus	exon	10038	10097	.	-	.	ID=Dca61345.1.exon12;Parent=Dca61345.1
scaffold9511	Augustus	exon	13522	13585	.	-	.	ID=Dca61345.1.exon13;Parent=Dca61345.1
scaffold9511	Augustus	exon	13673	13807	.	-	.	ID=Dca61345.1.exon14;Parent=Dca61345.1
scaffold9511	Augustus	exon	14030	14098	.	-	.	ID=Dca61345.1.exon15;Parent=Dca61345.1
scaffold9511	Augustus	exon	14171	14269	.	-	.	ID=Dca61345.1.exon16;Parent=Dca61345.1
scaffold9511	Augustus	exon	15018	15144	.	-	.	ID=Dca61345.1.exon17;Parent=Dca61345.1
scaffold9511	Augustus	exon	15965	16077	.	-	.	ID=Dca61345.1.exon18;Parent=Dca61345.1
scaffold9511	Augustus	exon	16817	16939	.	-	.	ID=Dca61345.1.exon19;Parent=Dca61345.1