Dca61429.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold9549)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61429.1 |
40 |
309 |
343 |
51.6 |
270 |
66 |
1e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
60 |
329 |
964 |
28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61429.1 |
59 |
296 |
343 |
30.02 |
238 |
43 |
4e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
731 |
1428 |
16.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9549 |
Augustus |
mRNA |
13711 |
15909 |
. |
+ |
. |
ID=Dca61429.1;Parent=Dca61429 |
| scaffold9549 |
Augustus |
exon |
13711 |
13828 |
. |
+ |
. |
ID=Dca61429.1.exon1;Parent=Dca61429.1 |
| scaffold9549 |
Augustus |
exon |
14996 |
15909 |
. |
+ |
. |
ID=Dca61429.1.exon2;Parent=Dca61429.1 |
