Dca61505.1
Annotation
- 4-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold9577)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61505.1 |
34 |
464 |
465 |
42.58 |
431 |
35 |
2e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
106 |
673 |
1313 |
43.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61505.1 |
314 |
463 |
465 |
11.82 |
150 |
36 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
642 |
1428 |
10.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9577 |
Augustus |
mRNA |
13956 |
17605 |
. |
- |
. |
ID=Dca61505.1;Parent=Dca61505 |
| scaffold9577 |
Augustus |
exon |
13956 |
14497 |
. |
- |
. |
ID=Dca61505.1.exon1;Parent=Dca61505.1 |
| scaffold9577 |
Augustus |
exon |
14627 |
14762 |
. |
- |
. |
ID=Dca61505.1.exon2;Parent=Dca61505.1 |
| scaffold9577 |
Augustus |
exon |
14868 |
15033 |
. |
- |
. |
ID=Dca61505.1.exon3;Parent=Dca61505.1 |
| scaffold9577 |
Augustus |
exon |
17052 |
17605 |
. |
- |
. |
ID=Dca61505.1.exon4;Parent=Dca61505.1 |
