Carnation DB

Dca61517.1

Annotation

11-exons
f-1
sp|B9HJU9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_719838#unknown#0F0P0C
sp|B9RTY3_RICCO#Protein C9orf114, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0913800#unknown#0F0P0C
Repeat List (scaffold958)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61517.1	1	361	363	63.91	361	63	2e-130
Target_name	Start	End	Length	Cov(%)
sp\|B9HJU9_POPTR	1	362	366	98.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61517.1	16	361	363	60.05	346	64	1e-125
Target_name	Start	End	Length	Cov(%)
AT5G19300.1	72	396	398	81.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold958	Augustus	mRNA	76407	83309	.	+	.	ID=Dca61517.1;Parent=Dca61517
scaffold958	Augustus	exon	76407	76655	.	+	.	ID=Dca61517.1.exon1;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	77196	77243	.	+	.	ID=Dca61517.1.exon2;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	77328	77498	.	+	.	ID=Dca61517.1.exon3;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	77588	77654	.	+	.	ID=Dca61517.1.exon4;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	78028	78092	.	+	.	ID=Dca61517.1.exon5;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	80780	80858	.	+	.	ID=Dca61517.1.exon6;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	81413	81531	.	+	.	ID=Dca61517.1.exon7;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	81623	81702	.	+	.	ID=Dca61517.1.exon8;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	82329	82398	.	+	.	ID=Dca61517.1.exon9;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	83015	83092	.	+	.	ID=Dca61517.1.exon10;Parent=Dca61517.1
scaffold958	Augus-PASA	exon	83244	83309	.	+	.	ID=Dca61517.1.exon11;Parent=Dca61517.1