Carnation DB

Dca61562.1

Annotation

20-exons
f-1
sp|D7SLV1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0021g02140#GO:0008270#1F0P0C
sp|B9GP99_POPTR#Histone ubiquitination proteins group#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HUPA902#GO:0008270#1F0P0C
Repeat List (scaffold96)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61562.1	1	842	871	49.25	842	50	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SLV1_VITVI	1	836	878	95.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61562.1	1	868	871	42.82	868	42	2e-179
Target_name	Start	End	Length	Cov(%)
AT2G44950.1	1	870	878	99.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold96	Augustus	mRNA	131260	143340	.	+	.	ID=Dca61562.1;Parent=Dca61562
scaffold96	Augustus	exon	131260	131382	.	+	.	ID=Dca61562.1.exon1;Parent=Dca61562.1
scaffold96	Augustus	exon	133683	133844	.	+	.	ID=Dca61562.1.exon2;Parent=Dca61562.1
scaffold96	Augustus	exon	134001	134058	.	+	.	ID=Dca61562.1.exon3;Parent=Dca61562.1
scaffold96	Augustus	exon	135474	135698	.	+	.	ID=Dca61562.1.exon4;Parent=Dca61562.1
scaffold96	Augustus	exon	135796	135954	.	+	.	ID=Dca61562.1.exon5;Parent=Dca61562.1
scaffold96	Augustus	exon	136440	136627	.	+	.	ID=Dca61562.1.exon6;Parent=Dca61562.1
scaffold96	Augustus	exon	136704	136787	.	+	.	ID=Dca61562.1.exon7;Parent=Dca61562.1
scaffold96	Augustus	exon	136928	137047	.	+	.	ID=Dca61562.1.exon8;Parent=Dca61562.1
scaffold96	Augustus	exon	137146	137332	.	+	.	ID=Dca61562.1.exon9;Parent=Dca61562.1
scaffold96	Augustus	exon	137619	137779	.	+	.	ID=Dca61562.1.exon10;Parent=Dca61562.1
scaffold96	Augustus	exon	137860	137931	.	+	.	ID=Dca61562.1.exon11;Parent=Dca61562.1
scaffold96	Augustus	exon	138086	138162	.	+	.	ID=Dca61562.1.exon12;Parent=Dca61562.1
scaffold96	Augustus	exon	139776	139970	.	+	.	ID=Dca61562.1.exon13;Parent=Dca61562.1
scaffold96	Augustus	exon	140651	140723	.	+	.	ID=Dca61562.1.exon14;Parent=Dca61562.1
scaffold96	Augustus	exon	140811	140897	.	+	.	ID=Dca61562.1.exon15;Parent=Dca61562.1
scaffold96	Augustus	exon	140969	141043	.	+	.	ID=Dca61562.1.exon16;Parent=Dca61562.1
scaffold96	Augustus	exon	141160	141270	.	+	.	ID=Dca61562.1.exon17;Parent=Dca61562.1
scaffold96	Augustus	exon	141374	141576	.	+	.	ID=Dca61562.1.exon18;Parent=Dca61562.1
scaffold96	Augustus	exon	141757	141919	.	+	.	ID=Dca61562.1.exon19;Parent=Dca61562.1
scaffold96	Augustus	exon	143248	143340	.	+	.	ID=Dca61562.1.exon20;Parent=Dca61562.1