Carnation DB

Dca61568.1

Annotation

6-exons
f-1
sp|B9I7B3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570757#unknown#0F0P0C
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-9944507 REVERSE LENGTH=642
Repeat List (scaffold96)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61568.1	22	332	415	39.51	311	53	7e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9I7B3_POPTR	254	567	646	48.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61568.1	22	332	415	38.07	311	51	1e-76
Target_name	Start	End	Length	Cov(%)
AT5G27920.1	250	563	642	48.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold96	Augustus	mRNA	180315	183563	.	+	.	ID=Dca61568.1;Parent=Dca61568
scaffold96	Augustus	exon	180315	180383	.	+	.	ID=Dca61568.1.exon1;Parent=Dca61568.1
scaffold96	Augustus	exon	181933	182034	.	+	.	ID=Dca61568.1.exon2;Parent=Dca61568.1
scaffold96	Augustus	exon	182122	182515	.	+	.	ID=Dca61568.1.exon3;Parent=Dca61568.1
scaffold96	Augustus	exon	182609	182738	.	+	.	ID=Dca61568.1.exon4;Parent=Dca61568.1
scaffold96	Augustus	exon	182827	183121	.	+	.	ID=Dca61568.1.exon5;Parent=Dca61568.1
scaffold96	Augustus	exon	183306	183563	.	+	.	ID=Dca61568.1.exon6;Parent=Dca61568.1