Carnation DB

Dca61587.1

Annotation

20-exons
f-1
sp|B9GRP4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830072#GO:0008250;GO:0004579;GO:0018279#1F1P1C
AT4G21150.1 | Symbols: HAP6 | ribophorin II (RPN2) family protein | chr4:11278646-11283599 FORWARD LENGTH=691
Repeat List (scaffold96)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61587.1	185	865	866	50.34	681	64	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GRP4_POPTR	7	693	694	98.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61587.1	183	865	866	46.53	683	59	0
Target_name	Start	End	Length	Cov(%)
AT4G21150.1	6	690	691	99.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold96	Augustus	mRNA	291179	297938	.	+	.	ID=Dca61587.1;Parent=Dca61587
scaffold96	Augustus	exon	291179	291713	.	+	.	ID=Dca61587.1.exon1;Parent=Dca61587.1
scaffold96	Augustus	exon	292607	292745	.	+	.	ID=Dca61587.1.exon2;Parent=Dca61587.1
scaffold96	Augustus	exon	293335	293524	.	+	.	ID=Dca61587.1.exon3;Parent=Dca61587.1
scaffold96	Augustus	exon	293627	293716	.	+	.	ID=Dca61587.1.exon4;Parent=Dca61587.1
scaffold96	Augustus	exon	293957	294013	.	+	.	ID=Dca61587.1.exon5;Parent=Dca61587.1
scaffold96	Augustus	exon	294159	294228	.	+	.	ID=Dca61587.1.exon6;Parent=Dca61587.1
scaffold96	Augustus	exon	294328	294392	.	+	.	ID=Dca61587.1.exon7;Parent=Dca61587.1
scaffold96	Augustus	exon	294601	294655	.	+	.	ID=Dca61587.1.exon8;Parent=Dca61587.1
scaffold96	Augustus	exon	294921	295048	.	+	.	ID=Dca61587.1.exon9;Parent=Dca61587.1
scaffold96	Augustus	exon	295142	295257	.	+	.	ID=Dca61587.1.exon10;Parent=Dca61587.1
scaffold96	Augustus	exon	295520	295589	.	+	.	ID=Dca61587.1.exon11;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	295715	295819	.	+	.	ID=Dca61587.1.exon12;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	295937	296026	.	+	.	ID=Dca61587.1.exon13;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	296156	296304	.	+	.	ID=Dca61587.1.exon14;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	296494	296605	.	+	.	ID=Dca61587.1.exon15;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	296676	296759	.	+	.	ID=Dca61587.1.exon16;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	296851	296931	.	+	.	ID=Dca61587.1.exon17;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	297008	297232	.	+	.	ID=Dca61587.1.exon18;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	297596	297718	.	+	.	ID=Dca61587.1.exon19;Parent=Dca61587.1
scaffold96	Augus-PASA	exon	297822	297938	.	+	.	ID=Dca61587.1.exon20;Parent=Dca61587.1