Dca61602.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold960)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61602.1 |
3 |
275 |
285 |
50.52 |
273 |
52 |
7e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
776 |
1051 |
1499 |
18.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61602.1 |
32 |
273 |
285 |
40.35 |
242 |
48 |
7e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
228 |
468 |
591 |
40.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold960 |
Augustus |
mRNA |
52156 |
53417 |
. |
+ |
. |
ID=Dca61602.1;Parent=Dca61602 |
| scaffold960 |
Augustus |
exon |
52156 |
52240 |
. |
+ |
. |
ID=Dca61602.1.exon1;Parent=Dca61602.1 |
| scaffold960 |
Augustus |
exon |
52645 |
53417 |
. |
+ |
. |
ID=Dca61602.1.exon2;Parent=Dca61602.1 |
