Carnation DB

Dca61710.1

Annotation

8-exons
f-1
sp|G5DWV8_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink). | chr3:289218-292557 FORWARD LENGTH=921
Repeat List (scaffold9645)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61710.1	240	957	961	51.3	718	68	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DWV8_SILLA	38	756	757	94.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61710.1	1	955	961	49.63	955	50	0
Target_name	Start	End	Length	Cov(%)
AT3G01810.1	1	917	921	99.56

seqname	source	feature	start	end	score	strand	frame	group
scaffold9645	Augus-PASA	mRNA	5019	10680	.	-	.	ID=Dca61710.1;Parent=Dca61710
scaffold9645	Augus-PASA	exon	5019	5372	.	-	.	ID=Dca61710.1.exon1;Parent=Dca61710.1
scaffold9645	Augus-PASA	exon	5998	6111	.	-	.	ID=Dca61710.1.exon2;Parent=Dca61710.1
scaffold9645	Augus-PASA	exon	6194	6394	.	-	.	ID=Dca61710.1.exon3;Parent=Dca61710.1
scaffold9645	Augus-PASA	exon	6891	7064	.	-	.	ID=Dca61710.1.exon4;Parent=Dca61710.1
scaffold9645	Augus-PASA	exon	7869	8093	.	-	.	ID=Dca61710.1.exon5;Parent=Dca61710.1
scaffold9645	Augus-PASA	exon	8195	8486	.	-	.	ID=Dca61710.1.exon6;Parent=Dca61710.1
scaffold9645	Augustus	exon	9017	9843	.	-	.	ID=Dca61710.1.exon7;Parent=Dca61710.1
scaffold9645	Augustus	exon	9982	10680	.	-	.	ID=Dca61710.1.exon8;Parent=Dca61710.1