Carnation DB

Dca61735.1

Annotation

7-exons
f-1
sp|B9IMJ5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_578806#GO:0005622;GO:0003676#1F0P1C
sp|B9SC24_RICCO#Zinc finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0701710#GO:0005622;GO:0003676#1F0P1C
Repeat List (scaffold966)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61735.1	26	678	682	47.94	653	50	4e-144
Target_name	Start	End	Length	Cov(%)
sp\|B9IMJ5_POPTR	121	736	737	83.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61735.1	5	678	682	44.57	674	43	1e-118
Target_name	Start	End	Length	Cov(%)
AT3G09850.1	111	780	781	85.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold966	Augus-PASA	mRNA	27402	31508	.	-	.	ID=Dca61735.1;Parent=Dca61735
scaffold966	Augus-PASA	exon	27402	28133	.	-	.	ID=Dca61735.1.exon1;Parent=Dca61735.1
scaffold966	Augus-PASA	exon	28238	28307	.	-	.	ID=Dca61735.1.exon2;Parent=Dca61735.1
scaffold966	Augus-PASA	exon	28765	28826	.	-	.	ID=Dca61735.1.exon3;Parent=Dca61735.1
scaffold966	Augus-PASA	exon	28913	28987	.	-	.	ID=Dca61735.1.exon4;Parent=Dca61735.1
scaffold966	Augus-PASA	exon	29396	29487	.	-	.	ID=Dca61735.1.exon5;Parent=Dca61735.1
scaffold966	Augustus	exon	29800	30781	.	-	.	ID=Dca61735.1.exon6;Parent=Dca61735.1
scaffold966	Augustus	exon	31473	31508	.	-	.	ID=Dca61735.1.exon7;Parent=Dca61735.1