Carnation DB

Dca61787.1

Annotation

7-exons
f-1
sp|G7IRR3_MEDTR#4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g094160#GO:0046429;GO:0005506;GO:0016114#2F1P0C
Repeat List (scaffold968)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61787.1	1	282	282	80.85	282	81	5e-133
Target_name	Start	End	Length	Cov(%)
sp\|G7IRR3_MEDTR	504	767	767	34.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61787.1	1	282	282	78.01	282	79	3e-129
Target_name	Start	End	Length	Cov(%)
AT5G60600.1	477	740	741	35.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold968	Augus-PASA	mRNA	53264	55847	.	-	.	ID=Dca61787.1;Parent=Dca61787
scaffold968	Augus-PASA	exon	53264	53365	.	-	.	ID=Dca61787.1.exon1;Parent=Dca61787.1
scaffold968	Augus-PASA	exon	53901	54005	.	-	.	ID=Dca61787.1.exon2;Parent=Dca61787.1
scaffold968	Augustus	exon	54094	54206	.	-	.	ID=Dca61787.1.exon3;Parent=Dca61787.1
scaffold968	Augustus	exon	54354	54553	.	-	.	ID=Dca61787.1.exon4;Parent=Dca61787.1
scaffold968	Augus-PASA	exon	54653	54730	.	-	.	ID=Dca61787.1.exon5;Parent=Dca61787.1
scaffold968	Augustus	exon	55510	55648	.	-	.	ID=Dca61787.1.exon6;Parent=Dca61787.1
scaffold968	Augustus	exon	55736	55847	.	-	.	ID=Dca61787.1.exon7;Parent=Dca61787.1