Carnation DB

Dca61969.1

Annotation

8-exons
f-1
sp|A5AKA8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0042g01220#GO:0005525;GO:0003924#2F0P0C
Os12t0607100-01 Similar to Heterochromatin protein (Fragment).
Repeat List (scaffold974)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61969.1	1	464	464	93.53	464	94	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AKA8_VITVI	1	464	464	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61969.1	1	464	464	91.59	464	92	0
Target_name	Start	End	Length	Cov(%)
Os12t0607100-01	1	464	465	99.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold974	Augus-PASA	mRNA	70210	73386	.	+	.	ID=Dca61969.1;Parent=Dca61969
scaffold974	Augus-PASA	exon	70210	70315	.	+	.	ID=Dca61969.1.exon1;Parent=Dca61969.1
scaffold974	Augus-PASA	exon	70401	70462	.	+	.	ID=Dca61969.1.exon2;Parent=Dca61969.1
scaffold974	Augus-PASA	exon	70544	70656	.	+	.	ID=Dca61969.1.exon3;Parent=Dca61969.1
scaffold974	Augus-PASA	exon	70868	70970	.	+	.	ID=Dca61969.1.exon4;Parent=Dca61969.1
scaffold974	Augus-PASA	exon	71229	71456	.	+	.	ID=Dca61969.1.exon5;Parent=Dca61969.1
scaffold974	Augus-PASA	exon	71562	71780	.	+	.	ID=Dca61969.1.exon6;Parent=Dca61969.1
scaffold974	Augus-PASA	exon	72397	72657	.	+	.	ID=Dca61969.1.exon7;Parent=Dca61969.1
scaffold974	Augus-PASA	exon	73084	73386	.	+	.	ID=Dca61969.1.exon8;Parent=Dca61969.1