Carnation DB

Dca62061.1

Annotation

9-exons
f-1
sp|B9I9Y4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_246020#GO:0000166;GO:0003723#2F0P0C
Os01t0938200-01 Similar to RNA-binding protein BRUNOL5 (Fragment).
Repeat List (scaffold979)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62061.1	28	438	439	71.29	411	75	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I9Y4_POPTR	12	432	432	97.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62061.1	31	439	439	63.09	409	66	6e-154
Target_name	Start	End	Length	Cov(%)
Os01t0938200-01	39	460	461	91.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold979	Augus-PASA	mRNA	14663	21317	.	+	.	ID=Dca62061.1;Parent=Dca62061
scaffold979	Augus-PASA	exon	14663	14882	.	+	.	ID=Dca62061.1.exon1;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	15025	15107	.	+	.	ID=Dca62061.1.exon2;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	18131	18182	.	+	.	ID=Dca62061.1.exon3;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	18275	18400	.	+	.	ID=Dca62061.1.exon4;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	18531	18610	.	+	.	ID=Dca62061.1.exon5;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	19434	19607	.	+	.	ID=Dca62061.1.exon6;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	19902	20214	.	+	.	ID=Dca62061.1.exon7;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	20659	20802	.	+	.	ID=Dca62061.1.exon8;Parent=Dca62061.1
scaffold979	Augus-PASA	exon	21190	21317	.	+	.	ID=Dca62061.1.exon9;Parent=Dca62061.1