Carnation DB

Dca62088.1

Annotation

7-exons
f-1
sp|B9GKJ1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_180407#unknown#0F0P0C
sp|D2WL67_POPTR#Theta class glutathione transferase GSTT1#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016740#1F0P0C
Repeat List (scaffold98)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62088.1	1	236	241	69.29	236	71	2e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9GKJ1_POPTR	1	236	237	99.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62088.1	1	236	241	63.48	236	65	3e-91
Target_name	Start	End	Length	Cov(%)
AT5G41240.1	1	236	591	39.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold98	Augus-PASA	mRNA	52686	54782	.	-	.	ID=Dca62088.1;Parent=Dca62088
scaffold98	Augus-PASA	exon	52686	52871	.	-	.	ID=Dca62088.1.exon1;Parent=Dca62088.1
scaffold98	Augus-PASA	exon	53277	53482	.	-	.	ID=Dca62088.1.exon2;Parent=Dca62088.1
scaffold98	Augus-PASA	exon	53590	53669	.	-	.	ID=Dca62088.1.exon3;Parent=Dca62088.1
scaffold98	Augus-PASA	exon	53772	53825	.	-	.	ID=Dca62088.1.exon4;Parent=Dca62088.1
scaffold98	Augus-PASA	exon	54043	54103	.	-	.	ID=Dca62088.1.exon5;Parent=Dca62088.1
scaffold98	Augus-PASA	exon	54541	54614	.	-	.	ID=Dca62088.1.exon6;Parent=Dca62088.1
scaffold98	Augus-PASA	exon	54718	54782	.	-	.	ID=Dca62088.1.exon7;Parent=Dca62088.1