Carnation DB

Dca62140.1

Annotation

9-exons
f-1
sp|B9I7W3_POPTR#Mitochondrial Rho GTPase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_823621#GO:0005741;GO:0005509;GO:0005525;GO:0003924;GO:0019725;GO:0007264#3F2P1C
Repeat List (scaffold980)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62140.1	187	339	360	28.33	153	67	3e-53
Target_name	Start	End	Length	Cov(%)
sp\|B9I7W3_POPTR	478	630	651	23.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62140.1	187	337	360	25.55	151	61	5e-50
Target_name	Start	End	Length	Cov(%)
AT5G27540.1	475	625	648	23.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold980	Augustus	mRNA	60056	67472	.	-	.	ID=Dca62140.1;Parent=Dca62140
scaffold980	Augustus	exon	60056	60129	.	-	.	ID=Dca62140.1.exon1;Parent=Dca62140.1
scaffold980	Augustus	exon	60485	60671	.	-	.	ID=Dca62140.1.exon2;Parent=Dca62140.1
scaffold980	Augustus	exon	61260	61410	.	-	.	ID=Dca62140.1.exon3;Parent=Dca62140.1
scaffold980	Augustus	exon	61539	61651	.	-	.	ID=Dca62140.1.exon4;Parent=Dca62140.1
scaffold980	Augustus	exon	63399	63458	.	-	.	ID=Dca62140.1.exon5;Parent=Dca62140.1
scaffold980	Augustus	exon	63537	63688	.	-	.	ID=Dca62140.1.exon6;Parent=Dca62140.1
scaffold980	Augustus	exon	65395	65468	.	-	.	ID=Dca62140.1.exon7;Parent=Dca62140.1
scaffold980	Augustus	exon	65879	65957	.	-	.	ID=Dca62140.1.exon8;Parent=Dca62140.1
scaffold980	Augustus	exon	67280	67472	.	-	.	ID=Dca62140.1.exon9;Parent=Dca62140.1