Carnation DB

Dca62364.1

Annotation

6-exons
f-1
sp|D7MHC8_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_658932#GO:0031072;GO:0051082;GO:0008152#2F1P0C
AT4G13670.1 | Symbols: PTAC5 | plastid transcriptionally active 5 | chr4:7948644-7950779 FORWARD LENGTH=387
Repeat List (scaffold99)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62364.1	66	450	450	38.22	385	44	1e-79
Target_name	Start	End	Length	Cov(%)
sp\|D7MHC8_ARALL	50	394	394	87.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62364.1	70	450	450	38.66	381	44	6e-80
Target_name	Start	End	Length	Cov(%)
AT4G13670.1	50	387	387	87.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold99	Augustus	mRNA	44017	46695	.	-	.	ID=Dca62364.1;Parent=Dca62364
scaffold99	Augustus	exon	44017	44112	.	-	.	ID=Dca62364.1.exon1;Parent=Dca62364.1
scaffold99	Augustus	exon	44199	44236	.	-	.	ID=Dca62364.1.exon2;Parent=Dca62364.1
scaffold99	Augustus	exon	44408	44624	.	-	.	ID=Dca62364.1.exon3;Parent=Dca62364.1
scaffold99	Augustus	exon	44910	45026	.	-	.	ID=Dca62364.1.exon4;Parent=Dca62364.1
scaffold99	Augustus	exon	45180	45275	.	-	.	ID=Dca62364.1.exon5;Parent=Dca62364.1
scaffold99	Augustus	exon	45907	46695	.	-	.	ID=Dca62364.1.exon6;Parent=Dca62364.1