Dca62377.1
Annotation
- 3-exons
- f-1
- sp|D7L1U6_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_319835#GO:0016021#0F0P1C
- AT2G21600.1 | Symbols: ATRER1B, RER1B | endoplasmatic reticulum retrieval protein 1B | chr2:9243550-9244579 FORWARD LENGTH=195
- Repeat List (scaffold99)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62377.1 |
1 |
195 |
195 |
74.35 |
195 |
75 |
2e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L1U6_ARALL |
1 |
193 |
193 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62377.1 |
1 |
195 |
195 |
73.33 |
195 |
73 |
2e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G21600.1 |
1 |
195 |
195 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold99 |
Augus-PASA |
mRNA |
109820 |
111884 |
. |
+ |
. |
ID=Dca62377.1;Parent=Dca62377 |
| scaffold99 |
Augus-PASA |
exon |
109820 |
110172 |
. |
+ |
. |
ID=Dca62377.1.exon1;Parent=Dca62377.1 |
| scaffold99 |
Augus-PASA |
exon |
111560 |
111740 |
. |
+ |
. |
ID=Dca62377.1.exon2;Parent=Dca62377.1 |
| scaffold99 |
Augus-PASA |
exon |
111831 |
111884 |
. |
+ |
. |
ID=Dca62377.1.exon3;Parent=Dca62377.1 |
