Carnation DB

Dca62381.1

Annotation

16-exons
f-1
sp|F6HAX1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0094g00440#GO:0005634;GO:0016458#0F1P1C
sp|D7LKG7_ARALL#Sas10/U3 ribonucleoprotein family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_903763#GO:0005634;GO:0030529;GO:0003676;GO:0016458#1F1P2C
Repeat List (scaffold99)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62381.1	7	660	660	51.96	654	51	3e-131
Target_name	Start	End	Length	Cov(%)
sp\|F6HAX1_VITVI	40	695	695	94.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62381.1	7	658	660	44.39	652	44	6e-110
Target_name	Start	End	Length	Cov(%)
AT2G43650.1	11	654	654	98.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold99	Augustus	mRNA	122413	128269	.	-	.	ID=Dca62381.1;Parent=Dca62381
scaffold99	Augustus	exon	122413	122544	.	-	.	ID=Dca62381.1.exon1;Parent=Dca62381.1
scaffold99	Augustus	exon	122662	122724	.	-	.	ID=Dca62381.1.exon2;Parent=Dca62381.1
scaffold99	Augus-PASA	exon	122810	122873	.	-	.	ID=Dca62381.1.exon3;Parent=Dca62381.1
scaffold99	Augus-PASA	exon	123214	123485	.	-	.	ID=Dca62381.1.exon4;Parent=Dca62381.1
scaffold99	Augustus	exon	123639	123756	.	-	.	ID=Dca62381.1.exon5;Parent=Dca62381.1
scaffold99	Augustus	exon	123849	123988	.	-	.	ID=Dca62381.1.exon6;Parent=Dca62381.1
scaffold99	Augustus	exon	124115	124183	.	-	.	ID=Dca62381.1.exon7;Parent=Dca62381.1
scaffold99	Augustus	exon	124325	124495	.	-	.	ID=Dca62381.1.exon8;Parent=Dca62381.1
scaffold99	Augustus	exon	125267	125446	.	-	.	ID=Dca62381.1.exon9;Parent=Dca62381.1
scaffold99	Augustus	exon	125905	125992	.	-	.	ID=Dca62381.1.exon10;Parent=Dca62381.1
scaffold99	Augustus	exon	126252	126385	.	-	.	ID=Dca62381.1.exon11;Parent=Dca62381.1
scaffold99	Augustus	exon	126602	126745	.	-	.	ID=Dca62381.1.exon12;Parent=Dca62381.1
scaffold99	Augustus	exon	126959	127101	.	-	.	ID=Dca62381.1.exon13;Parent=Dca62381.1
scaffold99	Augustus	exon	127743	127830	.	-	.	ID=Dca62381.1.exon14;Parent=Dca62381.1
scaffold99	Augustus	exon	128006	128097	.	-	.	ID=Dca62381.1.exon15;Parent=Dca62381.1
scaffold99	Augustus	exon	128185	128269	.	-	.	ID=Dca62381.1.exon16;Parent=Dca62381.1