Dca62385.1
Annotation
- 3-exons
- f-1
- sp|B9MXN3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1111564#GO:0005634;GO:0003677;GO:0006355#1F1P1C
- Os02t0706400-01 Similar to RADIALIS.
- Repeat List (scaffold99)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62385.1 |
1 |
45 |
80 |
38.75 |
45 |
69 |
7e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MXN3_POPTR |
1 |
45 |
85 |
52.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62385.1 |
12 |
45 |
80 |
31.25 |
34 |
74 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0706400-01 |
1 |
34 |
102 |
33.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold99 |
Augustus |
mRNA |
157339 |
158240 |
. |
+ |
. |
ID=Dca62385.1;Parent=Dca62385 |
| scaffold99 |
Augustus |
exon |
157339 |
157469 |
. |
+ |
. |
ID=Dca62385.1.exon1;Parent=Dca62385.1 |
| scaffold99 |
Augustus |
exon |
157555 |
157617 |
. |
+ |
. |
ID=Dca62385.1.exon2;Parent=Dca62385.1 |
| scaffold99 |
Augustus |
exon |
158192 |
158240 |
. |
+ |
. |
ID=Dca62385.1.exon3;Parent=Dca62385.1 |
