Carnation DB

Dca62488.1

Annotation

8-exons
f-1
sp|D7UA38_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0060g01090#unknown#0F0P0C
sp|B9RFJ9_RICCO#Kelch repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1435340#unknown#0F0P0C
Repeat List (scaffold993)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62488.1	1	599	600	54.83	599	50	9e-167
Target_name	Start	End	Length	Cov(%)
sp\|D7UA38_VITVI	1	637	640	99.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62488.1	9	112	600	5.5	104	32	4e-08
Target_name	Start	End	Length	Cov(%)
Os01t0300900-01	210	314	625	16.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold993	Augustus	mRNA	49804	52719	.	-	.	ID=Dca62488.1;Parent=Dca62488
scaffold993	Augustus	exon	49804	50079	.	-	.	ID=Dca62488.1.exon1;Parent=Dca62488.1
scaffold993	Augustus	exon	50188	50292	.	-	.	ID=Dca62488.1.exon2;Parent=Dca62488.1
scaffold993	Augustus	exon	50380	50769	.	-	.	ID=Dca62488.1.exon3;Parent=Dca62488.1
scaffold993	Augustus	exon	50862	51006	.	-	.	ID=Dca62488.1.exon4;Parent=Dca62488.1
scaffold993	Augustus	exon	51085	51251	.	-	.	ID=Dca62488.1.exon5;Parent=Dca62488.1
scaffold993	Augustus	exon	51370	51435	.	-	.	ID=Dca62488.1.exon6;Parent=Dca62488.1
scaffold993	Augustus	exon	51566	52093	.	-	.	ID=Dca62488.1.exon7;Parent=Dca62488.1
scaffold993	Augustus	exon	52594	52719	.	-	.	ID=Dca62488.1.exon8;Parent=Dca62488.1