Dca62516.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold9945)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62516.1 |
1 |
257 |
257 |
61.86 |
257 |
55 |
2e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
306 |
597 |
964 |
30.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62516.1 |
61 |
257 |
257 |
31.51 |
197 |
40 |
5e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
865 |
1067 |
1428 |
14.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9945 |
Augustus |
mRNA |
7753 |
8607 |
. |
- |
. |
ID=Dca62516.1;Parent=Dca62516 |
| scaffold9945 |
Augustus |
exon |
7753 |
8303 |
. |
- |
. |
ID=Dca62516.1.exon1;Parent=Dca62516.1 |
| scaffold9945 |
Augustus |
exon |
8385 |
8607 |
. |
- |
. |
ID=Dca62516.1.exon2;Parent=Dca62516.1 |
