Dca62549.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold996)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62549.1 |
1 |
372 |
375 |
37.86 |
372 |
35 |
3e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
162 |
565 |
1296 |
31.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62549.1 |
203 |
368 |
375 |
14.4 |
166 |
33 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0671800-01 |
302 |
465 |
573 |
28.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold996 |
Augustus |
mRNA |
36048 |
37252 |
. |
+ |
. |
ID=Dca62549.1;Parent=Dca62549 |
| scaffold996 |
Augustus |
exon |
36048 |
36637 |
. |
+ |
. |
ID=Dca62549.1.exon1;Parent=Dca62549.1 |
| scaffold996 |
Augustus |
exon |
36715 |
37252 |
. |
+ |
. |
ID=Dca62549.1.exon2;Parent=Dca62549.1 |
