Carnation DB

Dca6353.1

Annotation

6-exons
f-1
sp|E9KJ27_9ORYZ#Photosystem I P700 chlorophyll a apoprotein A1#Oryza australiensis#Name=psaA#GO:0009535;GO:0016021;GO:0009522;GO:0051539;GO:0016168;GO:0009055;GO:0000287;GO:0016491;GO:0022900;GO:0015979;GO:0018298;GO:0006810#5F4P3C
Repeat List (scaffold1248)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6353.1	673	1039	1105	16.19	367	49	7e-95
Target_name	Start	End	Length	Cov(%)
sp\|E9KJ27_9ORYZ	264	626	765	47.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6353.1	673	1039	1105	16.47	367	49	6e-98
Target_name	Start	End	Length	Cov(%)
ATCG00350.1	249	611	750	48.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1248	Augustus	mRNA	141704	147934	.	-	.	ID=Dca6353.1;Parent=Dca6353
scaffold1248	Augustus	exon	141704	141795	.	-	.	ID=Dca6353.1.exon1;Parent=Dca6353.1
scaffold1248	Augustus	exon	142545	142634	.	-	.	ID=Dca6353.1.exon2;Parent=Dca6353.1
scaffold1248	Augustus	exon	143139	144266	.	-	.	ID=Dca6353.1.exon3;Parent=Dca6353.1
scaffold1248	Augustus	exon	145495	145594	.	-	.	ID=Dca6353.1.exon4;Parent=Dca6353.1
scaffold1248	Augustus	exon	145697	146236	.	-	.	ID=Dca6353.1.exon5;Parent=Dca6353.1
scaffold1248	Augustus	exon	146567	147934	.	-	.	ID=Dca6353.1.exon6;Parent=Dca6353.1