Carnation DB

Dca6533.1

Annotation

6-exons
f-1
sp|D7MBM0_ARALL#40S ribosomal protein S11#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491674#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold1256)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6533.1	1	159	159	89.93	159	90	8e-81
Target_name	Start	End	Length	Cov(%)
sp\|D7MBM0_ARALL	1	159	159	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6533.1	1	159	159	88.67	159	89	8e-74
Target_name	Start	End	Length	Cov(%)
AT5G23740.1	1	159	159	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1256	Augustus	mRNA	57798	60948	.	-	.	ID=Dca6533.1;Parent=Dca6533
scaffold1256	Augustus	exon	57798	57888	.	-	.	ID=Dca6533.1.exon1;Parent=Dca6533.1
scaffold1256	Augustus	exon	58162	58251	.	-	.	ID=Dca6533.1.exon2;Parent=Dca6533.1
scaffold1256	Augustus	exon	58337	58481	.	-	.	ID=Dca6533.1.exon3;Parent=Dca6533.1
scaffold1256	Augustus	exon	60484	60584	.	-	.	ID=Dca6533.1.exon4;Parent=Dca6533.1
scaffold1256	Augustus	exon	60678	60718	.	-	.	ID=Dca6533.1.exon5;Parent=Dca6533.1
scaffold1256	Augustus	exon	60937	60948	.	-	.	ID=Dca6533.1.exon6;Parent=Dca6533.1