Carnation DB

Dca6534.1

Annotation

8-exons
f-1
sp|B9IL16_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_912362#unknown#0F0P0C
Repeat List (scaffold1256)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6534.1	75	510	514	54.47	436	60	6e-168
Target_name	Start	End	Length	Cov(%)
sp\|B9IL16_POPTR	26	493	503	93.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6534.1	73	512	514	48.63	440	53	5e-153
Target_name	Start	End	Length	Cov(%)
AT2G25270.1	68	539	545	86.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1256	Augustus	mRNA	63848	67972	.	+	.	ID=Dca6534.1;Parent=Dca6534
scaffold1256	Augustus	exon	63848	63875	.	+	.	ID=Dca6534.1.exon1;Parent=Dca6534.1
scaffold1256	Augustus	exon	63951	64004	.	+	.	ID=Dca6534.1.exon2;Parent=Dca6534.1
scaffold1256	Augustus	exon	65413	65651	.	+	.	ID=Dca6534.1.exon3;Parent=Dca6534.1
scaffold1256	Augustus	exon	65835	66016	.	+	.	ID=Dca6534.1.exon4;Parent=Dca6534.1
scaffold1256	Augustus	exon	66343	66627	.	+	.	ID=Dca6534.1.exon5;Parent=Dca6534.1
scaffold1256	Augustus	exon	66996	67067	.	+	.	ID=Dca6534.1.exon6;Parent=Dca6534.1
scaffold1256	Augustus	exon	67202	67526	.	+	.	ID=Dca6534.1.exon7;Parent=Dca6534.1
scaffold1256	Augustus	exon	67613	67972	.	+	.	ID=Dca6534.1.exon8;Parent=Dca6534.1