Dca6637.1
Annotation
- 2-exons
- f-1
- sp|Q9SJ38_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05200#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold1261)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6637.1 |
2 |
228 |
261 |
36.78 |
227 |
43 |
3e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJ38_ARATH |
492 |
718 |
1229 |
18.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6637.1 |
2 |
224 |
261 |
28.35 |
223 |
32 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
516 |
747 |
857 |
27.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1261 |
Augustus |
mRNA |
28294 |
29239 |
. |
- |
. |
ID=Dca6637.1;Parent=Dca6637 |
| scaffold1261 |
Augustus |
exon |
28294 |
28431 |
. |
- |
. |
ID=Dca6637.1.exon1;Parent=Dca6637.1 |
| scaffold1261 |
Augustus |
exon |
28592 |
29239 |
. |
- |
. |
ID=Dca6637.1.exon2;Parent=Dca6637.1 |
