Dca6638.1
Annotation
- 4-exons
- f-1
- sp|A5AMR9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012014#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- AT1G02790.1 | Symbols: PGA4 | polygalacturonase 4 | chr1:610681-612225 REVERSE LENGTH=422
- Repeat List (scaffold1261)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6638.1 |
41 |
337 |
349 |
39.54 |
297 |
46 |
1e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AMR9_VITVI |
482 |
780 |
863 |
34.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6638.1 |
27 |
336 |
349 |
37.53 |
310 |
43 |
2e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G02790.1 |
38 |
333 |
422 |
70.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1261 |
Augustus |
mRNA |
33628 |
36274 |
. |
- |
. |
ID=Dca6638.1;Parent=Dca6638 |
| scaffold1261 |
Augustus |
exon |
33628 |
33877 |
. |
- |
. |
ID=Dca6638.1.exon1;Parent=Dca6638.1 |
| scaffold1261 |
Augustus |
exon |
34030 |
34319 |
. |
- |
. |
ID=Dca6638.1.exon2;Parent=Dca6638.1 |
| scaffold1261 |
Augustus |
exon |
35200 |
35514 |
. |
- |
. |
ID=Dca6638.1.exon3;Parent=Dca6638.1 |
| scaffold1261 |
Augustus |
exon |
36080 |
36274 |
. |
- |
. |
ID=Dca6638.1.exon4;Parent=Dca6638.1 |
