Carnation DB

Dca6682.1

Annotation

8-exons
f-1
sp|D7LUU6_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_485854#GO:0016020#0F0P1C
AT3G54510.2 | Symbols: | Early-responsive to dehydration stress protein (ERD4) | chr3:20180339-20183220 FORWARD LENGTH=712
Repeat List (scaffold1264)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6682.1	1	587	593	60.7	587	52	0
Target_name	Start	End	Length	Cov(%)
sp\|D7LUU6_ARALL	1	701	712	98.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6682.1	1	589	593	55.14	589	47	4e-166
Target_name	Start	End	Length	Cov(%)
Os01t0950900-01	1	695	702	99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1264	Augustus	mRNA	70884	76626	.	-	.	ID=Dca6682.1;Parent=Dca6682
scaffold1264	Augustus	exon	70884	71030	.	-	.	ID=Dca6682.1.exon1;Parent=Dca6682.1
scaffold1264	Augustus	exon	71182	71415	.	-	.	ID=Dca6682.1.exon2;Parent=Dca6682.1
scaffold1264	Augustus	exon	71588	71866	.	-	.	ID=Dca6682.1.exon3;Parent=Dca6682.1
scaffold1264	Augustus	exon	71971	72250	.	-	.	ID=Dca6682.1.exon4;Parent=Dca6682.1
scaffold1264	Augustus	exon	72654	72952	.	-	.	ID=Dca6682.1.exon5;Parent=Dca6682.1
scaffold1264	Augustus	exon	73318	73512	.	-	.	ID=Dca6682.1.exon6;Parent=Dca6682.1
scaffold1264	Augustus	exon	74537	74600	.	-	.	ID=Dca6682.1.exon7;Parent=Dca6682.1
scaffold1264	Augustus	exon	76343	76626	.	-	.	ID=Dca6682.1.exon8;Parent=Dca6682.1