Carnation DB

Dca6733.1

Annotation

8-exons
f-1
sp|D7TG95_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0558g00020#unknown#0F0P0C
AT5G65770.2 | Symbols: LINC4 | little nuclei4 | chr5:26311587-26315544 FORWARD LENGTH=1042
Repeat List (scaffold1267)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6733.1	7	1073	1074	49.16	1067	47	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TG95_VITVI	3	1116	1117	99.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6733.1	7	978	1074	40.31	972	43	0
Target_name	Start	End	Length	Cov(%)
AT5G65770.2	13	972	1042	92.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1267	Augus-PASA	mRNA	47743	54344	.	-	.	ID=Dca6733.1;Parent=Dca6733
scaffold1267	Augus-PASA	exon	47743	47874	.	-	.	ID=Dca6733.1.exon1;Parent=Dca6733.1
scaffold1267	Augus-PASA	exon	48745	49033	.	-	.	ID=Dca6733.1.exon2;Parent=Dca6733.1
scaffold1267	Augustus	exon	49139	50901	.	-	.	ID=Dca6733.1.exon3;Parent=Dca6733.1
scaffold1267	Augustus	exon	51407	51490	.	-	.	ID=Dca6733.1.exon4;Parent=Dca6733.1
scaffold1267	Augustus	exon	51616	51886	.	-	.	ID=Dca6733.1.exon5;Parent=Dca6733.1
scaffold1267	Augustus	exon	52413	52666	.	-	.	ID=Dca6733.1.exon6;Parent=Dca6733.1
scaffold1267	Augustus	exon	52761	52970	.	-	.	ID=Dca6733.1.exon7;Parent=Dca6733.1
scaffold1267	Augustus	exon	54123	54344	.	-	.	ID=Dca6733.1.exon8;Parent=Dca6733.1