Carnation DB

Dca6773.1

Annotation

8-exons
f-1
sp|B9MXG9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_796714#unknown#0F0P0C
sp|B9N8U5_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828569#unknown#0F0P0C
Repeat List (scaffold1269)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6773.1	5	294	609	18.71	290	39	1e-41
Target_name	Start	End	Length	Cov(%)
sp\|B9MXG9_POPTR	45	316	443	61.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6773.1	470	609	609	10.83	140	47	6e-30
Target_name	Start	End	Length	Cov(%)
AT5G05420.1	5	143	143	97.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1269	Augustus	mRNA	53583	60757	.	-	.	ID=Dca6773.1;Parent=Dca6773
scaffold1269	Augustus	exon	53583	53661	.	-	.	ID=Dca6773.1.exon1;Parent=Dca6773.1
scaffold1269	Augustus	exon	53779	53827	.	-	.	ID=Dca6773.1.exon2;Parent=Dca6773.1
scaffold1269	Augustus	exon	53929	53970	.	-	.	ID=Dca6773.1.exon3;Parent=Dca6773.1
scaffold1269	Augustus	exon	54053	54140	.	-	.	ID=Dca6773.1.exon4;Parent=Dca6773.1
scaffold1269	Augustus	exon	54237	54491	.	-	.	ID=Dca6773.1.exon5;Parent=Dca6773.1
scaffold1269	Augustus	exon	54579	54795	.	-	.	ID=Dca6773.1.exon6;Parent=Dca6773.1
scaffold1269	Augustus	exon	56095	56305	.	-	.	ID=Dca6773.1.exon7;Parent=Dca6773.1
scaffold1269	Augustus	exon	59869	60757	.	-	.	ID=Dca6773.1.exon8;Parent=Dca6773.1