Carnation DB

Dca6840.1

Annotation

5-exons
f-1
sp|B9H4C3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_559736#GO:0003824#1F0P0C
AT1G47271.1 | Symbols: | Cystathionine beta-synthase (CBS) family protein | chr1:17328856-17330343 FORWARD LENGTH=193
Repeat List (scaffold1271)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6840.1	1	198	198	66.16	198	65	2e-71
Target_name	Start	End	Length	Cov(%)
sp\|B9H4C3_POPTR	1	201	201	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6840.1	29	198	198	54.54	170	64	6e-60
Target_name	Start	End	Length	Cov(%)
AT1G47271.1	27	193	193	86.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1271	Augustus	mRNA	9159	10228	.	-	.	ID=Dca6840.1;Parent=Dca6840
scaffold1271	Augustus	exon	9159	9301	.	-	.	ID=Dca6840.1.exon1;Parent=Dca6840.1
scaffold1271	Augustus	exon	9398	9458	.	-	.	ID=Dca6840.1.exon2;Parent=Dca6840.1
scaffold1271	Augustus	exon	9552	9625	.	-	.	ID=Dca6840.1.exon3;Parent=Dca6840.1
scaffold1271	Augustus	exon	9742	9823	.	-	.	ID=Dca6840.1.exon4;Parent=Dca6840.1
scaffold1271	Augustus	exon	9992	10228	.	-	.	ID=Dca6840.1.exon5;Parent=Dca6840.1