Dca6923.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold12756)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6923.1 |
2 |
311 |
315 |
61.9 |
310 |
63 |
1e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
67 |
376 |
964 |
32.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6923.1 |
14 |
297 |
315 |
35.87 |
284 |
39 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
779 |
1428 |
20.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12756 |
Augustus |
mRNA |
15793 |
19893 |
. |
- |
. |
ID=Dca6923.1;Parent=Dca6923 |
| scaffold12756 |
Augustus |
exon |
15793 |
15824 |
. |
- |
. |
ID=Dca6923.1.exon1;Parent=Dca6923.1 |
| scaffold12756 |
Augustus |
exon |
18978 |
19893 |
. |
- |
. |
ID=Dca6923.1.exon2;Parent=Dca6923.1 |
