Carnation DB

Dca6978.1

Annotation

5-exons
f-1
sp|Q0WLG3_ARATH#Fibrillarin homolog#Arabidopsis thaliana (Mouse-ear cress)#Name=At5g52470#GO:0008168;GO:0003723;GO:0006364;GO:0008033#2F2P0C
Repeat List (scaffold128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6978.1	66	174	174	54.02	109	87	2e-51
Target_name	Start	End	Length	Cov(%)
sp\|Q0WLG3_ARATH	63	171	308	35.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6978.1	66	174	174	54.59	109	88	3e-53
Target_name	Start	End	Length	Cov(%)
AT4G25630.1	74	182	320	34.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold128	Augustus	mRNA	55350	57002	.	+	.	ID=Dca6978.1;Parent=Dca6978
scaffold128	Augustus	exon	55350	55368	.	+	.	ID=Dca6978.1.exon1;Parent=Dca6978.1
scaffold128	Augustus	exon	55802	56118	.	+	.	ID=Dca6978.1.exon2;Parent=Dca6978.1
scaffold128	Augus-PASA	exon	56630	56725	.	+	.	ID=Dca6978.1.exon3;Parent=Dca6978.1
scaffold128	Augus-PASA	exon	56821	56898	.	+	.	ID=Dca6978.1.exon4;Parent=Dca6978.1
scaffold128	Augustus	exon	56988	57002	.	+	.	ID=Dca6978.1.exon5;Parent=Dca6978.1