Carnation DB

Dca6980.1

Annotation

7-exons
f-1
sp|B9RIU7_RICCO#Multidrug resistance pump, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1582850#GO:0016020;GO:0015297;GO:0015238#2F0P1C
Repeat List (scaffold128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6980.1	1	492	494	67.4	492	68	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RIU7_RICCO	1	488	489	99.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6980.1	3	483	494	66.19	481	68	0
Target_name	Start	End	Length	Cov(%)
AT4G25640.2	5	480	514	92.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold128	Augus-PASA	mRNA	60461	66531	.	-	.	ID=Dca6980.1;Parent=Dca6980
scaffold128	Augus-PASA	exon	60461	60541	.	-	.	ID=Dca6980.1.exon1;Parent=Dca6980.1
scaffold128	Augus-PASA	exon	60642	60728	.	-	.	ID=Dca6980.1.exon2;Parent=Dca6980.1
scaffold128	Augus-PASA	exon	60820	60938	.	-	.	ID=Dca6980.1.exon3;Parent=Dca6980.1
scaffold128	Augus-PASA	exon	61088	61326	.	-	.	ID=Dca6980.1.exon4;Parent=Dca6980.1
scaffold128	Augus-PASA	exon	61415	61471	.	-	.	ID=Dca6980.1.exon5;Parent=Dca6980.1
scaffold128	Augus-PASA	exon	61657	62282	.	-	.	ID=Dca6980.1.exon6;Parent=Dca6980.1
scaffold128	Augus-PASA	exon	66256	66531	.	-	.	ID=Dca6980.1.exon7;Parent=Dca6980.1