Dca6998.1
Annotation
- 3-exons
- f-1
- sp|B9NER8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595820#unknown#0F0P0C
- Os11t0565920-00 Leucine-rich repeat domain containing protein.
- Repeat List (scaffold128)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6998.1 |
44 |
840 |
841 |
39.35 |
797 |
36 |
8e-126
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NER8_POPTR |
32 |
953 |
963 |
95.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6998.1 |
44 |
833 |
841 |
34.95 |
790 |
32 |
9e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0565920-00 |
125 |
1041 |
1056 |
86.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold128 |
Augustus |
mRNA |
195526 |
198380 |
. |
+ |
. |
ID=Dca6998.1;Parent=Dca6998 |
| scaffold128 |
Augustus |
exon |
195526 |
195862 |
. |
+ |
. |
ID=Dca6998.1.exon1;Parent=Dca6998.1 |
| scaffold128 |
Augustus |
exon |
195935 |
197433 |
. |
+ |
. |
ID=Dca6998.1.exon2;Parent=Dca6998.1 |
| scaffold128 |
Augustus |
exon |
197691 |
198380 |
. |
+ |
. |
ID=Dca6998.1.exon3;Parent=Dca6998.1 |
