Dca7006.1
Annotation
- 2-exons
- f-1
- sp|B9NER8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595820#unknown#0F0P0C
- Os06t0140300-01 Leucine-rich repeat, N-terminal domain containing protein.
- Repeat List (scaffold128)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7006.1 |
149 |
416 |
466 |
18.45 |
268 |
30 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NER8_POPTR |
376 |
649 |
963 |
28.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7006.1 |
15 |
451 |
466 |
31.33 |
437 |
32 |
8e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0140300-01 |
5 |
454 |
885 |
50.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold128 |
Augustus |
mRNA |
271914 |
273495 |
. |
+ |
. |
ID=Dca7006.1;Parent=Dca7006 |
| scaffold128 |
Augustus |
exon |
271914 |
272785 |
. |
+ |
. |
ID=Dca7006.1.exon1;Parent=Dca7006.1 |
| scaffold128 |
Augustus |
exon |
272967 |
273495 |
. |
+ |
. |
ID=Dca7006.1.exon2;Parent=Dca7006.1 |
