Carnation DB

Dca7013.1

Annotation

12-exons
f-1
sp|B9N5D2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_928371#GO:0016021;GO:0022857#1F0P1C
AT3G13050.1 | Symbols: | Major facilitator superfamily protein | chr3:4176866-4178868 FORWARD LENGTH=500
Repeat List (scaffold1280)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7013.1	9	499	810	42.46	491	70	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N5D2_POPTR	8	500	503	98.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7013.1	1	488	810	37.65	488	62	1e-163
Target_name	Start	End	Length	Cov(%)
AT3G13050.1	1	494	500	98.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1280	Augustus	mRNA	9721	17179	.	+	.	ID=Dca7013.1;Parent=Dca7013
scaffold1280	Augustus	exon	9721	9992	.	+	.	ID=Dca7013.1.exon1;Parent=Dca7013.1
scaffold1280	Augustus	exon	10106	10343	.	+	.	ID=Dca7013.1.exon2;Parent=Dca7013.1
scaffold1280	Augustus	exon	10659	11178	.	+	.	ID=Dca7013.1.exon3;Parent=Dca7013.1
scaffold1280	Augustus	exon	11261	11463	.	+	.	ID=Dca7013.1.exon4;Parent=Dca7013.1
scaffold1280	Augustus	exon	11753	12030	.	+	.	ID=Dca7013.1.exon5;Parent=Dca7013.1
scaffold1280	Augustus	exon	14030	14105	.	+	.	ID=Dca7013.1.exon6;Parent=Dca7013.1
scaffold1280	Augustus	exon	14186	14328	.	+	.	ID=Dca7013.1.exon7;Parent=Dca7013.1
scaffold1280	Augustus	exon	14792	14878	.	+	.	ID=Dca7013.1.exon8;Parent=Dca7013.1
scaffold1280	Augustus	exon	15106	15189	.	+	.	ID=Dca7013.1.exon9;Parent=Dca7013.1
scaffold1280	Augustus	exon	15924	16131	.	+	.	ID=Dca7013.1.exon10;Parent=Dca7013.1
scaffold1280	Augustus	exon	16558	16643	.	+	.	ID=Dca7013.1.exon11;Parent=Dca7013.1
scaffold1280	Augustus	exon	16942	17179	.	+	.	ID=Dca7013.1.exon12;Parent=Dca7013.1