Carnation DB

Dca7017.1

Annotation

31-exons
f-1
sp|F6H1V3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g00830#GO:0005524;GO:0004674#2F0P0C
AT1G53440.1 | Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035
Repeat List (scaffold1280)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7017.1	25	176	1688	2.84	152	32	9e-12
Target_name	Start	End	Length	Cov(%)
sp\|F6H1V3_VITVI	722	873	1638	9.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7017.1	858	1009	1688	3.02	152	34	4e-14
Target_name	Start	End	Length	Cov(%)
AT1G53440.1	100	251	1035	14.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1280	Augustus	mRNA	36682	47437	.	-	.	ID=Dca7017.1;Parent=Dca7017
scaffold1280	Augustus	exon	36682	37140	.	-	.	ID=Dca7017.1.exon1;Parent=Dca7017.1
scaffold1280	Augustus	exon	37363	37513	.	-	.	ID=Dca7017.1.exon2;Parent=Dca7017.1
scaffold1280	Augustus	exon	37641	38191	.	-	.	ID=Dca7017.1.exon3;Parent=Dca7017.1
scaffold1280	Augustus	exon	38300	38412	.	-	.	ID=Dca7017.1.exon4;Parent=Dca7017.1
scaffold1280	Augustus	exon	38512	38643	.	-	.	ID=Dca7017.1.exon5;Parent=Dca7017.1
scaffold1280	Augustus	exon	38766	38964	.	-	.	ID=Dca7017.1.exon6;Parent=Dca7017.1
scaffold1280	Augustus	exon	39134	39498	.	-	.	ID=Dca7017.1.exon7;Parent=Dca7017.1
scaffold1280	Augustus	exon	39586	39635	.	-	.	ID=Dca7017.1.exon8;Parent=Dca7017.1
scaffold1280	Augustus	exon	40203	40268	.	-	.	ID=Dca7017.1.exon9;Parent=Dca7017.1
scaffold1280	Augustus	exon	40490	40561	.	-	.	ID=Dca7017.1.exon10;Parent=Dca7017.1
scaffold1280	Augustus	exon	40639	40710	.	-	.	ID=Dca7017.1.exon11;Parent=Dca7017.1
scaffold1280	Augustus	exon	40809	40880	.	-	.	ID=Dca7017.1.exon12;Parent=Dca7017.1
scaffold1280	Augustus	exon	40975	41043	.	-	.	ID=Dca7017.1.exon13;Parent=Dca7017.1
scaffold1280	Augustus	exon	41121	41192	.	-	.	ID=Dca7017.1.exon14;Parent=Dca7017.1
scaffold1280	Augustus	exon	41306	41377	.	-	.	ID=Dca7017.1.exon15;Parent=Dca7017.1
scaffold1280	Augustus	exon	41772	42214	.	-	.	ID=Dca7017.1.exon16;Parent=Dca7017.1
scaffold1280	Augustus	exon	42446	42596	.	-	.	ID=Dca7017.1.exon17;Parent=Dca7017.1
scaffold1280	Augustus	exon	42724	43274	.	-	.	ID=Dca7017.1.exon18;Parent=Dca7017.1
scaffold1280	Augustus	exon	43383	43495	.	-	.	ID=Dca7017.1.exon19;Parent=Dca7017.1
scaffold1280	Augustus	exon	43595	43726	.	-	.	ID=Dca7017.1.exon20;Parent=Dca7017.1
scaffold1280	Augustus	exon	43849	44047	.	-	.	ID=Dca7017.1.exon21;Parent=Dca7017.1
scaffold1280	Augustus	exon	44217	44581	.	-	.	ID=Dca7017.1.exon22;Parent=Dca7017.1
scaffold1280	Augustus	exon	44669	44718	.	-	.	ID=Dca7017.1.exon23;Parent=Dca7017.1
scaffold1280	Augustus	exon	45286	45351	.	-	.	ID=Dca7017.1.exon24;Parent=Dca7017.1
scaffold1280	Augustus	exon	45573	45644	.	-	.	ID=Dca7017.1.exon25;Parent=Dca7017.1
scaffold1280	Augustus	exon	45722	45793	.	-	.	ID=Dca7017.1.exon26;Parent=Dca7017.1
scaffold1280	Augustus	exon	45892	45963	.	-	.	ID=Dca7017.1.exon27;Parent=Dca7017.1
scaffold1280	Augustus	exon	46058	46126	.	-	.	ID=Dca7017.1.exon28;Parent=Dca7017.1
scaffold1280	Augustus	exon	46204	46275	.	-	.	ID=Dca7017.1.exon29;Parent=Dca7017.1
scaffold1280	Augustus	exon	46389	46474	.	-	.	ID=Dca7017.1.exon30;Parent=Dca7017.1
scaffold1280	Augustus	exon	47399	47437	.	-	.	ID=Dca7017.1.exon31;Parent=Dca7017.1