Dca7110.1
Annotation
- 2-exons
- f-1
- sp|Q53K55_ORYSJ#Retrotransposon protein, putative, Ty1-copia sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g23750#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold12851)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7110.1 |
6 |
521 |
522 |
61.11 |
516 |
58 |
4e-180
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53K55_ORYSJ |
354 |
903 |
938 |
58.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7110.1 |
21 |
172 |
522 |
12.64 |
152 |
44 |
5e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
700 |
1428 |
10.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12851 |
Augustus |
mRNA |
3079 |
5469 |
. |
+ |
. |
ID=Dca7110.1;Parent=Dca7110 |
| scaffold12851 |
Augustus |
exon |
3079 |
3643 |
. |
+ |
. |
ID=Dca7110.1.exon1;Parent=Dca7110.1 |
| scaffold12851 |
Augustus |
exon |
4466 |
5469 |
. |
+ |
. |
ID=Dca7110.1.exon2;Parent=Dca7110.1 |
