Dca7117.1
Annotation
- 3-exons
- f-1
- sp|A5ALS1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001578#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1286)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7117.1 |
20 |
449 |
485 |
34.22 |
430 |
37 |
4e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ALS1_VITVI |
393 |
790 |
1323 |
30.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7117.1 |
139 |
326 |
485 |
12.37 |
188 |
32 |
8e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
594 |
781 |
1428 |
13.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1286 |
Augustus |
mRNA |
51839 |
54223 |
. |
+ |
. |
ID=Dca7117.1;Parent=Dca7117 |
| scaffold1286 |
Augustus |
exon |
51839 |
52252 |
. |
+ |
. |
ID=Dca7117.1.exon1;Parent=Dca7117.1 |
| scaffold1286 |
Augustus |
exon |
52546 |
53514 |
. |
+ |
. |
ID=Dca7117.1.exon2;Parent=Dca7117.1 |
| scaffold1286 |
Augustus |
exon |
54149 |
54223 |
. |
+ |
. |
ID=Dca7117.1.exon3;Parent=Dca7117.1 |
