Carnation DB

Dca7208.1

Annotation

7-exons
f-1
sp|D7STG8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g00170#unknown#0F0P0C
AT1G15215.2 | Symbols: | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5238096-5239770 FORWARD LENGTH=258
Repeat List (scaffold129)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7208.1	7	196	209	45.93	190	49	1e-42
Target_name	Start	End	Length	Cov(%)
sp\|D7STG8_VITVI	15	200	245	75.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7208.1	7	194	209	37.32	188	40	9e-31
Target_name	Start	End	Length	Cov(%)
AT1G15215.2	14	211	258	76.74

seqname	source	feature	start	end	score	strand	frame	group
scaffold129	Augustus	mRNA	233872	239310	.	+	.	ID=Dca7208.1;Parent=Dca7208
scaffold129	Augustus	exon	233872	233969	.	+	.	ID=Dca7208.1.exon1;Parent=Dca7208.1
scaffold129	Augustus	exon	236129	236174	.	+	.	ID=Dca7208.1.exon2;Parent=Dca7208.1
scaffold129	Augustus	exon	236266	236425	.	+	.	ID=Dca7208.1.exon3;Parent=Dca7208.1
scaffold129	Augustus	exon	236509	236572	.	+	.	ID=Dca7208.1.exon4;Parent=Dca7208.1
scaffold129	Augustus	exon	237115	237166	.	+	.	ID=Dca7208.1.exon5;Parent=Dca7208.1
scaffold129	Augustus	exon	237426	237569	.	+	.	ID=Dca7208.1.exon6;Parent=Dca7208.1
scaffold129	Augustus	exon	239245	239310	.	+	.	ID=Dca7208.1.exon7;Parent=Dca7208.1