Dca7293.1
Annotation
- 3-exons
- f-1
- sp|A5B3V0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_038754#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- sp|Q9SJP0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15410#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold12953)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7293.1 |
152 |
775 |
783 |
28.48 |
624 |
33 |
1e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B3V0_VITVI |
4 |
678 |
1387 |
48.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7293.1 |
657 |
773 |
783 |
5.1 |
117 |
35 |
9e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
5 |
120 |
591 |
19.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12953 |
Augustus |
mRNA |
8296 |
11033 |
. |
+ |
. |
ID=Dca7293.1;Parent=Dca7293 |
| scaffold12953 |
Augustus |
exon |
8296 |
9982 |
. |
+ |
. |
ID=Dca7293.1.exon1;Parent=Dca7293.1 |
| scaffold12953 |
Augustus |
exon |
10279 |
10428 |
. |
+ |
. |
ID=Dca7293.1.exon2;Parent=Dca7293.1 |
| scaffold12953 |
Augustus |
exon |
10519 |
11033 |
. |
+ |
. |
ID=Dca7293.1.exon3;Parent=Dca7293.1 |
