Carnation DB

Dca7338.1

Annotation

5-exons
f-1
sp|B9RH13_RICCO#Translocon-associated protein, beta subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1445980#GO:0005783;GO:0016021#0F0P2C
Repeat List (scaffold1298)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7338.1	9	193	194	67.01	185	70	2e-69
Target_name	Start	End	Length	Cov(%)
sp\|B9RH13_RICCO	5	189	208	88.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7338.1	17	194	194	60.3	178	65	1e-62
Target_name	Start	End	Length	Cov(%)
AT5G14030.1	16	194	195	91.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1298	Augustus	mRNA	27991	30969	.	-	.	ID=Dca7338.1;Parent=Dca7338
scaffold1298	Augustus	exon	27991	28104	.	-	.	ID=Dca7338.1.exon1;Parent=Dca7338.1
scaffold1298	Augustus	exon	28325	28396	.	-	.	ID=Dca7338.1.exon2;Parent=Dca7338.1
scaffold1298	Augustus	exon	28507	28615	.	-	.	ID=Dca7338.1.exon3;Parent=Dca7338.1
scaffold1298	Augustus	exon	28700	28798	.	-	.	ID=Dca7338.1.exon4;Parent=Dca7338.1
scaffold1298	Augustus	exon	30779	30969	.	-	.	ID=Dca7338.1.exon5;Parent=Dca7338.1