Carnation DB

Dca7384.1

Annotation

5-exons
f-1
sp|B9RW93_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1176800#unknown#0F0P0C
sp|G7J2Q1_MEDTR#Protein SUPPRESSOR OF GENE SILENCING-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g098260#unknown#0F0P0C
Repeat List (scaffold13)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7384.1	17	577	586	54.77	561	54	1e-166
Target_name	Start	End	Length	Cov(%)
sp\|B9RW93_RICCO	36	633	634	94.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7384.1	156	574	586	43.34	419	60	7e-147
Target_name	Start	End	Length	Cov(%)
Os12t0197500-01	175	598	610	69.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13	Augus-PASA	mRNA	169421	172552	.	-	.	ID=Dca7384.1;Parent=Dca7384
scaffold13	Augus-PASA	exon	169421	169652	.	-	.	ID=Dca7384.1.exon1;Parent=Dca7384.1
scaffold13	Augus-PASA	exon	169903	170045	.	-	.	ID=Dca7384.1.exon2;Parent=Dca7384.1
scaffold13	Augus-PASA	exon	170162	170406	.	-	.	ID=Dca7384.1.exon3;Parent=Dca7384.1
scaffold13	Augus-PASA	exon	171105	171402	.	-	.	ID=Dca7384.1.exon4;Parent=Dca7384.1
scaffold13	Augustus	exon	171710	172552	.	-	.	ID=Dca7384.1.exon5;Parent=Dca7384.1