Carnation DB

Dca7420.1

Annotation

7-exons
f-1
sp|B9N412_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_268074#GO:0005622;GO:0003676;GO:0008270#2F0P1C
AT5G26610.1 | Symbols: | D111/G-patch domain-containing protein | chr5:9375456-9376991 FORWARD LENGTH=301
Repeat List (scaffold13)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7420.1	11	286	289	71.97	276	76	2e-110
Target_name	Start	End	Length	Cov(%)
sp\|B9N412_POPTR	1	271	271	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7420.1	2	286	289	64.7	285	64	1e-87
Target_name	Start	End	Length	Cov(%)
AT5G26610.1	15	301	301	95.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13	Augustus	mRNA	500509	502479	.	+	.	ID=Dca7420.1;Parent=Dca7420
scaffold13	Augustus	exon	500509	500538	.	+	.	ID=Dca7420.1.exon1;Parent=Dca7420.1
scaffold13	Augus-PASA	exon	500904	501090	.	+	.	ID=Dca7420.1.exon2;Parent=Dca7420.1
scaffold13	Augustus	exon	501263	501417	.	+	.	ID=Dca7420.1.exon3;Parent=Dca7420.1
scaffold13	Augustus	exon	501682	501825	.	+	.	ID=Dca7420.1.exon4;Parent=Dca7420.1
scaffold13	Augus-PASA	exon	501911	502011	.	+	.	ID=Dca7420.1.exon5;Parent=Dca7420.1
scaffold13	Augus-PASA	exon	502093	502258	.	+	.	ID=Dca7420.1.exon6;Parent=Dca7420.1
scaffold13	Augus-PASA	exon	502393	502479	.	+	.	ID=Dca7420.1.exon7;Parent=Dca7420.1