Carnation DB

Dca7553.1

Annotation

5-exons
f-1
sp|A6H5D1_SAPOF#rRNA N-glycosidase#Saponaria officinalis (Common soapwort) (Lychnis saponaria)#Name=saporin-1#GO:0030598;GO:0006952;GO:0017148#1F2P0C
Repeat List (scaffold1305)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7553.1	1	272	561	32.08	272	65	6e-99
Target_name	Start	End	Length	Cov(%)
sp\|A6H5D1_SAPOF	6	271	292	91.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7553.1	295	425	561	8.02	131	35	6e-15
Target_name	Start	End	Length	Cov(%)
AT4G23220.1	186	314	728	17.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1305	Augustus	mRNA	70329	75738	.	-	.	ID=Dca7553.1;Parent=Dca7553
scaffold1305	Augustus	exon	70329	70430	.	-	.	ID=Dca7553.1.exon1;Parent=Dca7553.1
scaffold1305	Augustus	exon	70534	70609	.	-	.	ID=Dca7553.1.exon2;Parent=Dca7553.1
scaffold1305	Augustus	exon	70709	70730	.	-	.	ID=Dca7553.1.exon3;Parent=Dca7553.1
scaffold1305	Augustus	exon	73138	73808	.	-	.	ID=Dca7553.1.exon4;Parent=Dca7553.1
scaffold1305	Augustus	exon	74924	75738	.	-	.	ID=Dca7553.1.exon5;Parent=Dca7553.1