Carnation DB

Dca7557.1

Annotation

6-exons
f-1
sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
sp|O23410_ARATH#Reverse transcriptase like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=dl3835c#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold13054)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7557.1	237	519	520	27.3	283	46	8e-74
Target_name	Start	End	Length	Cov(%)
sp\|F4NCH2_BETVU	222	532	1378	22.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7557.1	249	519	520	17.3	271	32	1e-32
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	166	445	857	32.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13054	Augustus	mRNA	1206	4001	.	+	.	ID=Dca7557.1;Parent=Dca7557
scaffold13054	Augustus	exon	1206	1655	.	+	.	ID=Dca7557.1.exon1;Parent=Dca7557.1
scaffold13054	Augustus	exon	2203	2307	.	+	.	ID=Dca7557.1.exon2;Parent=Dca7557.1
scaffold13054	Augustus	exon	2422	2515	.	+	.	ID=Dca7557.1.exon3;Parent=Dca7557.1
scaffold13054	Augustus	exon	2710	2802	.	+	.	ID=Dca7557.1.exon4;Parent=Dca7557.1
scaffold13054	Augustus	exon	3113	3646	.	+	.	ID=Dca7557.1.exon5;Parent=Dca7557.1
scaffold13054	Augustus	exon	3715	4001	.	+	.	ID=Dca7557.1.exon6;Parent=Dca7557.1