Dca7608.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold13087)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7608.1 |
11 |
243 |
301 |
48.17 |
233 |
63 |
2e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
491 |
721 |
896 |
25.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7608.1 |
11 |
221 |
301 |
22.59 |
211 |
33 |
7e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1028 |
1229 |
1428 |
14.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13087 |
Augustus |
mRNA |
5372 |
9491 |
. |
+ |
. |
ID=Dca7608.1;Parent=Dca7608 |
| scaffold13087 |
Augustus |
exon |
5372 |
6033 |
. |
+ |
. |
ID=Dca7608.1.exon1;Parent=Dca7608.1 |
| scaffold13087 |
Augustus |
exon |
9248 |
9491 |
. |
+ |
. |
ID=Dca7608.1.exon2;Parent=Dca7608.1 |
