Carnation DB

Dca7667.1

Annotation

5-exons
f-1
sp|B9I0E9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_569136#unknown#0F0P0C
Repeat List (scaffold1310)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7667.1	1	430	440	41.13	430	38	7e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9I0E9_POPTR	1	473	497	95.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7667.1	1	426	440	38.86	426	37	7e-51
Target_name	Start	End	Length	Cov(%)
AT3G20490.1	1	441	458	96.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1310	Augus-PASA	mRNA	46707	50918	.	-	.	ID=Dca7667.1;Parent=Dca7667
scaffold1310	Augus-PASA	exon	46707	46763	.	-	.	ID=Dca7667.1.exon1;Parent=Dca7667.1
scaffold1310	Augus-PASA	exon	48447	48509	.	-	.	ID=Dca7667.1.exon2;Parent=Dca7667.1
scaffold1310	Augus-PASA	exon	48749	48992	.	-	.	ID=Dca7667.1.exon3;Parent=Dca7667.1
scaffold1310	Augustus	exon	49115	49814	.	-	.	ID=Dca7667.1.exon4;Parent=Dca7667.1
scaffold1310	Augustus	exon	50660	50918	.	-	.	ID=Dca7667.1.exon5;Parent=Dca7667.1